Icarus

QUAST Contig Browser by Center for Algorithmic Biotechnology

Assemblies: IDBA-UD, MEGAHIT, metaSPAdes, Ray
Contig size viewer
QUAST report

Select a viewer of contigs aligned to one of the following reference genomes:

Genome # fragments Length, bp Mean genome fraction, % # misassembled blocks
Arthrobacter sp. FB24 4 5 070 478 99.305 38
Arthrobacter sp. TB 23 102 3 469 685 99.056 26
Azotobacter vinelandii DJ 1 5 365 318 98.465 128
Bacillus sp. EGD-AK10 56 4 330 010 99.914 26
Bacillus sp. WBUNB009 100 5 579 903 99.026 364
Bacteriovorax sp. DB6 IX 202 2 509 297 99.866 21
Bacteroides sp. 4 1 36 13 4 609 651 98.162 207
Brevibacillus laterosporus PE36 50 5 113 802 99.878 21
Campylobacter coli 96 1 304 162 99.288 22
Chloroflexi bacterium 33 787 896 99.652 67
Enterobacteriaceae bacterium LSJC7 16 4 598 330 99.830 61
Facklamia ingava 3 1 759 076 97.806 204
Firmicutes bacterium CAG 170 121 2 273 918 99.329 17
Gamma proteobacterium IMCC2047 63 462 461 99.916 0
Mycoplasma gallisepticum 1 926 650 97.616 29
Oceanicaulis alexandrii HTCC2633 1 3 168 988 99.790 15
Patulibacter medicamentivorans 221 4 772 438 99.957 8
Pseudomonas sp. EGD-AK9 283 3 884 949 99.832 20
Shigella boydii 77 5 148 272 95.280 1305
Streptococcus sobrinus 127 1 739 382 99.167 144